Package: SeuratData 0.2.2.9002

Paul Hoffman

SeuratData: Install and Manage Seurat Datasets

Single cell RNA sequencing datasets can be large, consisting of matrices that contain expression data for several thousand features across several thousand cells. This package is designed to easily install, manage, and learn about various single-cell datasets, provided Seurat objects and distributed as independent packages.

Authors:Rahul Satija [aut], Paul Hoffman [aut, cre], Andrew Butler [aut], Austin Hartman [ctb], Yuhan Hao [ctb], Gesmira Molla [ctb]

SeuratData_0.2.2.9002.tar.gz
SeuratData_0.2.2.9002.zip(r-4.7-any)SeuratData_0.2.2.9002.zip(r-4.6-any)SeuratData_0.2.2.9002.zip(r-4.5-any)
SeuratData_0.2.2.9002.tgz(r-4.6-any)SeuratData_0.2.2.9002.tgz(r-4.5-any)
SeuratData_0.2.2.9002.tar.gz(r-4.7-any)SeuratData_0.2.2.9002.tar.gz(r-4.6-any)
SeuratData_0.2.2.9002.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
SeuratData/json (API)

# Install 'SeuratData' in R:
install.packages('SeuratData', repos = c('https://almirall-rddatascience.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/satijalab/seurat-data/issues

Pkgdown/docs site:https://www.satijalab.org

On CRAN:

Conda:

datasetssingle-cellsingle-cell-genomics

7.45 score 161 stars 3.9k scripts 6 exports 144 dependencies

Last updated from:3e51f44303. Checks:9 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-develOK221
source / vignettesOK389
linux-releaseOK379
macos-releaseOK179
macos-oldrelOK297
windows-develOK152
windows-releaseOK288
windows-oldrelOK180
wasm-releaseOK320

Exports:AvailableDataInstallDataInstalledDataLoadDataRemoveDataUpdateData

Dependencies:abindaskpassbase64encBHbitopsbslibcachemcaToolscliclustercodetoolscommonmarkcowplotcpp11crayoncrosstalkcurldata.tabledeldirdigestdotCall64dplyrdqrngevaluatefarverfastDummiesfastmapfitdistrplusFNNfontawesomefsfuturefuture.applygenericsggplot2ggrepelggridgesglobalsgluegoftestgplotsgridExtragtablegtoolsherehighrhtmltoolshtmlwidgetshttpuvhttricaigraphirlbaisobandjquerylibjsonliteKernSmoothknitrlabelinglaterlatticelazyevallifecyclelistenvlmtestmagrittrMASSMatrixmatrixStatsmemoisemimeminiUInlmeopensslotelparallellypatchworkpbapplypillarpkgconfigplotlyplyrpngpolyclipprogressrpromisespurrrR6RANNrappdirsRColorBrewerRcppRcppAnnoyRcppArmadilloRcppEigenRcppHNSWRcppProgressRcppThreadRcppTOMLreshape2reticulaterlangrmarkdownROCRrprojrootRSpectraRtsneS7sassscalesscattermoresctransformSeuratSeuratObjectshinysitmosourcetoolsspspamspatstat.dataspatstat.explorespatstat.geomspatstat.randomspatstat.sparsespatstat.univarspatstat.utilsstringistringrsurvivalsystensortibbletidyrtidyselecttinytexutf8uwotvctrsviridisLitewithrxfunxtableyamlzoo